Tutorials
From CoGepedia
Here you can find tutorials informing you how to get the most out of CoGe's tools. (Please note that this wiki is new, and we are working on adding information as quickly as we can.)
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Original tutorials
You can find a list of CoGe's old tutorials here.
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What to do with a genome in the early stages of assembly?
Genome Comparison and Analysis using SynMap and GEvo
Ortholog identification and conserved noncoding sequence (CNS) analysis
- Ramosa2 orthologs and CNSs: ramosa2 Encodes a LATERAL ORGAN BOUNDARY Domain Protein That Determines the Fate of Stem Cells in Branch Meristems of Maize [1] Special thanks to Devin O’Connor for writing this tutorial!
- ↑ Esteban Bortiri, George Chuck, Erik Vollbrecht, Torbert Rocheford, Rob Martienssen, and Sarah Hakea. 2006 ramosa2 Encodes a LATERAL ORGAN BOUNDARY Domain Protein That Determines the Fate of Stem Cells in Branch Meristems of Maize. Plant Cell 18:574–585
Videos
OrganismView
OrganismView is CoGe's tool for finding genomes for your organism of interest.
GenomeView
GenomeView is CoGe's interactive genome browser for visualizing genomes, identifying regions of interest, and extracting underlying DNA sequence and genomic features (e.g. genes)
FeatList
FeatList is CoGe's tool for managing lists of genomic features.
SeqView
SeqView is CoGe's tool for generating primary sequence data in fasta format.
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